Mapped reads for uncultivated Xanthomonadales bacterium UBA11164 geno... - SRA

SRX3577966: Mapped reads for uncultivated Xanthomonadales bacterium UBA11164 genome recovered from SRX806416
1 ILLUMINA (Illumina HiSeq 2500) run: 393,581 spots, 73M bases, 40.9Mb downloads

Design: Reads from SRX806416 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11164 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Xanthomonadales bacterium UBA11164 genome recovered from SRX806416

SAMN08018905 • SRS2847694 • All experiments • All runs

Organism: Lysobacterales bacterium

Library:

Name: UBA11164_library

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 393,581 spots, 73M bases, 40.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR6488319	393,581	73M	40.9Mb	2018-02-23

ID:: 4963468

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Sequence Read Archive

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